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EBI
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Ligand clusters for UniProt code Q9RA63
Ligand clusters for Q9RA63: Chaperone protein ClpB from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Top 6 (of 9) ligand clusters
Cluster 1.
7 ligand types
15 ligands
Cluster 2.
3 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1qvrA
Structures
PDB
Schematic diagram
1qvr
A
4lj7
A
4fd2
A
4lj4
A
4lj5
A
more ...
Cluster 1 contains 7 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 2
PDB codes:
4lj9
(A),
4lja
(A).
2. Ligand:
GAI × 1
guanidine
Guanidine
PDB code:
4lja
(A).
3. Ligand:
ADP × 5
Adenosine-5'-Diphosphate
PDB codes:
4fcv
(A),
4fcw
(A),
4fd2
(A),
4lj5
(A),
4lj8
(A).
4. Ligand:
ACP × 3
Phosphomethylphosphonic acid adenylate ester
PDB codes:
4lj6
(A),
4lj9
(A),
4lja
(A).
5. Ligand:
PO4 × 2
Phosphate ion
PDB codes:
4lj4
(A),
4lj7
(A).
6. Ligand:
ANP × 1
Phosphoaminophosphonic acid-Adenylate ester
PDB code:
1qvr
(A).
7. Ligand:
MNT × 1
2'(3')-O-N-Methylanthraniloyl-Adenosine-5'-Diphosphate
PDB code:
4lj7
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
GAI × 1
guanidine
Guanidine
PDB code:
4hse
(A).
2. Ligand:
ADP × 1
Adenosine-5'-Diphosphate
PDB code:
4hse
(A).
3. Ligand:
ANP × 1
Phosphoaminophosphonic acid-Adenylate ester
PDB code:
1qvr
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
4lj6
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Pt
1. Metal:
_PT × 1
PDB code:
1qvr
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Pt
1. Metal:
_PT × 1
PDB code:
1qvr
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Pt
1. Metal:
_PT × 1
PDB code:
1qvr
(A).