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Ligand clusters for UniProt code Q9KB30

Ligand clusters for Q9KB30: Reducing end xylose-releasing exo-oligoxylanase from Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)

6 ligand clusters
Cluster 1.
3 ligand types
4 ligands
Cluster 2.
1 ligand type
8 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
6 ligands
Representative protein: 2drsA  
JSmol
 

Structures

PDB   Schematic diagram
2drsA    
2drrA    
2drqA    
3a3vA    
1wu6A    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 1wu6(A), 3a3v(A).


 
2. Ligand: XYP × 1
Beta-D-Xylopyranose
PDB code: 1wu5(A).


 
3. Ligand: XYP-XYP × 1
XYP=Beta-D-Xylopyranose.
PDB code: 1wu6(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 8
glycerin
Glycerol
PDB codes: 1wu4(A), 1wu5(A), 1wu6(A), 2dro(A), 2drq(A), 2drr(A), 2drs(A), 3a3v(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 2dro(A), 2drr(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 2drr(A), 3a3v(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3a3v(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Ni
 
1. Metal: _NI × 6
PDB codes: 1wu4(A), 2dro(A), 2drq(A), 2drr(A), 2drs(A), 3a3v(A).

 

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