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EBI
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Ligand clusters for UniProt code Q9I7A8
Ligand clusters for Q9I7A8: Peptide deformylase from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
3 ligand clusters
Cluster 1.
5 ligand types
9 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Representative protein: 1ix1A
Structures
PDB
Schematic diagram
1ix1
A
1n5n
A
1lry
A
1s17
A
Cluster 1 contains 5 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 3
PDB codes:
1ix1
(A),
1lry
(A),
1n5n
(A).
2. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
1n5n
(A),
3. Ligand:
BB2 × 2
Actinonin
PDB codes:
1ix1
(A),
1lry
(A).
4. Ligand:
GNR × 1
2-(3,4-Dihydro-3-Oxo-2h-Benzo[b][1,4]thiazin-2-Yl)-N- Hydroxyacetamide
PDB code:
1s17
(A).
_Ni
5. Metal:
_NI × 1
PDB code:
1s17
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1s17
(A).
2. Ligand:
MHA × 1
(Carbamoylmethyl-Carboxymethyl-Amino)-Acetic acid
PDB code:
1ix1
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
MHA × 1
(Carbamoylmethyl-Carboxymethyl-Amino)-Acetic acid
PDB code:
1ix1
(A).