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Ligand clusters for UniProt code Q9HX08

Ligand clusters for Q9HX08: Flavin prenyltransferase UbiX from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

4 ligand clusters
Cluster 1.
5 ligand types
15 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
3 ligand types
3 ligands
Cluster 4.
1 ligand type
1 ligand
Representative protein: 4zavA  
JSmol
 

Structures

PDB   Schematic diagram
4zavA    
4zawA    
4zanA    
4zafA    
4zazA    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: PO4 × 5
Phosphate ion
PDB codes: 4zav(A), 4zaw(A), 4zax(A), 4zay(A), 4zaz(A).


 
2. Ligand: 4LR × 4
Dimethylallyl monophosphate
PDB codes: 4zaf(A), 4zag(A), 4zal(A), 4zan(A).


 
3. Ligand: 4LS × 3
1-Deoxy-1-[7,8-Dimethyl-5-(3-Methylbut-2-En-1-Yl)-2,4- Dioxo-1,3,4,5-Tetrahydrobenzo[g]pteridin-
10(2h)-Yl]-5- O-Phosphono-D-Ribitol
PDB codes: 4zav(A), 4zay(A), 4zaz(A).


 
4. Ligand: 4LU × 2
1-Deoxy-5-O-Phosphono-1-(3,3,4,5-Tetramethyl-9,11- Dioxo-2,3,8,9,10,11-Hexahydro-7h-Quinolino[1,8-
Fg]pteridin-12-Ium-7-Yl)-D-Ribitol
PDB codes: 4zaw(A), 4zax(A).


 
5. Ligand: SO4 × 1
Sulfate ion
PDB code: 3zqu(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: FNR × 1
1-Deoxy-1-(7,8-Dimethyl-2,4-Dioxo-3,4- Dihydro-2h-Benzo[g]pteridin-1-Id-10(5h)-Yl)-5-O-
Phosphonato-D-Ribitol
PDB code: 3zqu(A).

 

 Cluster 3 contains 3 ligand types

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 4zaw(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 3zqu(A).

_Na
 
3. Metal: _NA × 1
PDB code: 4zaz(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

__K
 
1. Metal: __K × 1
PDB code: 4zag(A).

 

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