Ligand clusters for UniProt code Q9BYW2

Ligand clusters for Q9BYW2: Histone-lysine N-methyltransferase SETD2 from Homo sapiens

		6 ligand clusters Cluster 1. 10 ligand types 16 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 32 ligands Cluster 5. 1 ligand type 16 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 5jlbA

Structures

PDB		Schematic diagram
5jlbA
5lt8A
5v21A
5v22A
5jjyA
		more ...

Cluster 1 contains 10 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: SAM × 1 ademetionine S-Adenosylmethionine PDB code: 5v21(A).
		2. Ligand: SAH × 7 S-Adenosyl-L-Homocysteine PDB codes: 4h12(A), 5jjy(A), 5jlb(A), 5jle(A), 5v22(A), 6j9j(A), 6vdb(A).
		3. Ligand: 0UM × 1 (2s,5s)-2-Amino-6-[(2r,3s,4r,5r)-5-(6-Amino-9h-Purin-9- Yl)-3,4-Dihydroxytetrahydrofuran-2-Yl]-5- (Propylamino)hexanoic acid PDB code: 4fmu(A).
		4. Ligand: 76H × 1 [(2~{s},5~{r})-1-[(2~{r},3~{s},4~{r},5~{r})-5-(6- Aminopurin-9-Yl)-3,4-Bis(oxidanyl)oxolan-2-Yl]-5- Azaniumyl-6-Oxidanyl-6-Oxidanylidene-Hexan-2-Yl]- Propyl-Azanium PDB code: 5lss(A).
		5. Ligand: 76J × 1 [(2~{s},5~{s})-1-[(2~{r},3~{s},4~{r},5~{r})-5-(6- Aminopurin-9-Yl)-3,4-Bis(oxidanyl)oxolan-2-Yl]-5- Azaniumyl-6-Oxidanyl-6-Oxidanylidene-Hexan-2-Yl]- Pentyl-Azanium PDB code: 5lt6(A).
		6. Ligand: 76K × 1 [(2~{s},5~{r})-1-[(2~{r},3~{s},4~{r},5~{r})-5-(6- Aminopurin-9-Yl)-3,4-Bis(oxidanyl)oxolan-2-Yl]-5- Azaniumyl-6-Oxidanyl-6-Oxidanylidene-Hexan-2-Yl]-(3- Oxidanylpropyl)azanium PDB code: 5lsz(A).
		7. Ligand: 76L × 1 [(2~{s},5~{r})-1-[(2~{r},3~{s},4~{r},5~{r})-5-(6- Aminopurin-9-Yl)-3,4-Bis(oxidanyl)oxolan-2-Yl]-5- Azaniumyl-6-Oxidanyl-6-Oxidanylidene-Hexan-2-Yl]- [(2~{r})-2-Oxidanylpropyl]azanium PDB code: 5lt7(A).
		8. Ligand: 76M × 1 [(2~{s},5~{r})-1-[(2~{r},3~{s},4~{r},5~{r})-5-(6- Aminopurin-9-Yl)-3,4-Bis(oxidanyl)oxolan-2-Yl]-5- Azaniumyl-6-Oxidanyl-6-Oxidanylidene-Hexan-2-Yl]-(2- Methylpropyl)azanium PDB code: 5lsy(A).
		9. Ligand: 76O × 1 [(2~{r},5~{s})-1-[(2~{r},3~{s},4~{r},5~{r})-5-(6- Aminopurin-9-Yl)-3,4-Bis(oxidanyl)oxolan-2-Yl]-5- Azaniumyl-6-Oxidanyl-6-Oxidanylidene-Hexan-2-Yl]- (Phenylmethyl)azanium PDB code: 5lsx(A).
		10. Ligand: SFG × 1 Sinefungin PDB code: 5lt8(A).

Cluster 2 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 5jlb(A).

Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 5jlb(A).

Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
_Zn		1. Metal: _ZN × 32 PDB codes: 4fmu(A), 4h12(A), 5jjy(A), 5jlb(A), 5jle(A), 5lss(A), 5lsx(A), 5lsy(A), 5lsz(A), 5lt6(A), 5lt7(A), 5lt8(A), 5v21(A), 5v22(A), 6j9j(A), 6vdb(A),

Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
_Zn		1. Metal: _ZN × 16 PDB codes: 4fmu(A), 4h12(A), 5jjy(A), 5jlb(A), 5jle(A), 5lss(A), 5lsx(A), 5lsy(A), 5lsz(A), 5lt6(A), 5lt7(A), 5lt8(A), 5v21(A), 5v22(A), 6j9j(A), 6vdb(A).

Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
_Cl		1. Metal: _CL × 1 PDB code: 4h12(A).