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EBI
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Ligand clusters for UniProt code Q859P9
Ligand clusters for Q859P9: Virion DNA-directed RNA polymerase from Enterobacteria phage N4
2 ligand clusters
Cluster 1.
8 ligand types
19 ligands
Cluster 2.
2 ligand types
8 ligands
Representative protein: 3c46A
Structures
PDB
Schematic diagram
3c46
A
3q0a
A
3q22
A
4ff4
A
4ff1
A
more ...
Cluster 1 contains 8 ligand types
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Ligand
Description
_Mn
1. Metal:
_MN × 6
PDB codes:
3q23
(A),
4ff2
(A),
4ff3
(A),
4ff4
(A).
_Mg
2. Metal:
_MG × 1
PDB code:
3q22
(A).
3. Ligand:
5GP × 3
Guanosine-5'-Monophosphate
PDB codes:
4ff2
(A),
4ff3
(A),
4ff4
(A).
4. Ligand:
GTP × 3
Guanosine-5'-Triphosphate
PDB codes:
3q0a
(A),
3q22
(A),
5. Ligand:
ATP × 2
Adenosine-5'-Triphosphate
PDB codes:
4ff2
(A),
4ff3
(A).
6. Ligand:
G2P × 2
Phosphomethylphosphonic acid guanylate ester
PDB codes:
3q23
(A),
7. Ligand:
AMP × 1
Adenosine monophosphate
PDB code:
4ff4
(A).
8. Ligand:
POP × 1
Pyrophosphate 2-
PDB code:
4ff4
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
PO4 × 5
Phosphate ion
PDB codes:
3q0a
(A),
4ff1
(A),
4ff2
(A),
4ff3
(A),
4ff4
(A).
2. Ligand:
2HP × 3
Dihydrogenphosphate ion
PDB codes:
3c46
(A),
3q22
(A),
3q23
(A).