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EBI
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Ligand clusters for UniProt code Q70LM7
Ligand clusters for Q70LM7: Linear gramicidin synthase subunit A from Brevibacillus parabrevis
Top 6 (of 15) ligand clusters
Cluster 1.
5 ligand types
10 ligands
Cluster 2.
3 ligand types
4 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6mfzA
Structures
PDB
Schematic diagram
6mfz
A
6mfy
A
6mfx
A
6mfw
A
5es5
A
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
VAL × 3
valine
PDB codes:
5es7
(A),
6mfw
(A),
6mfx
(A).
2. Ligand:
APC × 4
Diphosphomethylphosphonic acid adenosyl ester
PDB codes:
5es7
(A),
6mfw
(A),
6mfx
(A),
6ulz
(A).
3. Ligand:
5S4 × 1
[(3~{r})-4-[[3-[2-[[(2~{s})-2-Azanyl-3-Methyl- Butanoyl]amino]ethylamino]-3-Oxidanylidene-
Propyl]amino]-2,2-Dimethyl-3-Oxidanyl-4-Oxidanylidene- Butyl] dihydrogen phosphate
PDB code:
5es8
(A).
4. Ligand:
KIV × 1
3-Methyl-2-Oxobutanoic acid
PDB code:
6ulz
(A).
5. Ligand:
SO4 × 1
Sulfate ion
PDB code:
5es5
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
PNS × 2
4'-Phosphopantetheine
PDB codes:
6mfy
(A),
6mfz
(A).
2. Ligand:
9EF × 1
N-[2-(Acetylamino)ethyl]-N~3~-[(2r)-2-Hydroxy-3,3- Dimethyl-4-(Phosphonooxy)butanoyl]-Beta-
Alaninamide
PDB code:
6mfx
(A).
3. Ligand:
JQG × 1
(2~{r})-~{N}-[3-[2-[[(2~{s})-2-Formamido-3-Methyl- Butanoyl]amino]ethylamino]-3-Oxidanylidene-
Propyl]-3, 3-Dimethyl-2-Oxidanyl-4-[Oxidanyl-Bis(oxidanylidene)- L^{6}-Phosphanyl]oxy-Butanamide
PDB code:
6mfw
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
FON × 2
N-{[4-({[(6r)-2-Amino-5-Formyl-4-Oxo-1,4,5,6,7,8- Hexahydropteridin-6-
Yl]methyl}amino)phenyl]carbonyl}- L-Glutamic acid
PDB codes:
5es7
(A),
6mfw
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
PNS × 1
4'-Phosphopantetheine
PDB code:
5es9
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
6mfw
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
6mfy
(A).