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EBI
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Structure Databases
PDBsum
Ligand clusters for UniProt code Q70ET3
Ligand clusters for Q70ET3: NTPase (Fragment) from Norwalk virus
Top 6 (of 7) ligand clusters
Cluster 1.
5 ligand types
21 ligands
Cluster 2.
1 ligand type
4 ligands
Cluster 3.
1 ligand type
4 ligands
Cluster 4.
1 ligand type
4 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
2 ligand types
3 ligands
Representative protein: 1sh3A
Structures
PDB
Schematic diagram
1sh3
A
3h5x
A
3bsn
A
3h5y
A
3bso
A
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
_Mn
1. Metal:
_MN × 12
PDB codes:
3bsn
(A),
3bso
(A),
3h5x
(A),
3h5y
(A),
4qpx
(A),
5tsn
(A),
2. Ligand:
GOL × 5
glycerin
Glycerol
PDB codes:
3bsn
(A),
3bso
(A),
3h5x
(A),
3h5y
(A),
4qpx
(A).
3. Ligand:
CTP × 2
Cytidine-5'-Triphosphate
PDB codes:
3bso
(A),
3h5y
(A).
4. Ligand:
CSG × 1
2'-Amino-2'-Deoxycytidine 5'-(Tetrahydrogen triphosphate)
PDB code:
3h5x
(A).
5. Ligand:
N5C × 1
5-Nitrocytidine 5'-(Tetrahydrogen triphosphate)
PDB code:
3bsn
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
3bsn
(A),
3bso
(A),
3h5x
(A),
3h5y
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
3bsn
(A),
3bso
(A),
3h5x
(A),
3h5y
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
3bsn
(A),
3bso
(A),
3h5x
(A),
3h5y
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4qpx
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
_Mn
1. Metal:
_MN × 2
PDB codes:
3h5x
(A),
3h5y
(A).
_Mg
2. Metal:
_MG × 1
PDB code:
1sh3
(A).