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Ligand clusters for UniProt code Q6PYX1
Ligand clusters for Q6PYX1: Hepatitis B virus receptor binding protein (Fragment) from Homo sapiens
5 ligand clusters
Cluster 1.
5 ligand types
5 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 1ce1H
Structures
PDB
Schematic diagram
1ce1
H
3eo0
B
1um5
H
1um4
H
3dro
B
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
GLY-THR-SER-SER-PRO-SER-ALA-ASP × 1
PDB code:
1ce1
(H).
2. Ligand:
LEU-GLU-LEU-ASP-LYS-TRP-ALA × 1
PDB code:
3dro
(B).
3. Ligand:
LEU-GLU-LEU-ASP-LYS-TRP-ALA-SER × 1
PDB code:
3drq
(B).
4. Ligand:
SH4 × 1
(1r)-1-Phenylethyl 4-(Acetylamino)benzylphosphonate
PDB code:
1um4
(H).
5. Ligand:
SS1 × 1
1-Phenylethanol
PDB code:
1um5
(H).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG-NAG-BMA-MAN-NAG-GAL-MAN-NAG-FUC × 2
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose,
GAL
=Beta-D-Galactopyranose,
FUC
=Alpha-L-Fucopyranose.
PDB codes:
5vgp
(A),
7lbl
(A).
2. Ligand:
NAG-NAG-BMA-MAN-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB code:
4qgt
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
3drq
(B),
3eo0
(B).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3eo0
(B).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3eo0
(B).