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Ligand clusters for UniProt code Q6PYX1

Ligand clusters for Q6PYX1: Hepatitis B virus receptor binding protein (Fragment) from Homo sapiens

5 ligand clusters
Cluster 1.
5 ligand types
5 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 1ce1H  
JSmol
 

Structures

PDB   Schematic diagram
1ce1H    
3eo0B    
1um5H    
1um4H    
3droB    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: GLY-THR-SER-SER-PRO-SER-ALA-ASP × 1
PDB code: 1ce1(H).


 
2. Ligand: LEU-GLU-LEU-ASP-LYS-TRP-ALA × 1
PDB code: 3dro(B).


 
3. Ligand: LEU-GLU-LEU-ASP-LYS-TRP-ALA-SER × 1
PDB code: 3drq(B).


 
4. Ligand: SH4 × 1
(1r)-1-Phenylethyl 4-(Acetylamino)benzylphosphonate
PDB code: 1um4(H).


 
5. Ligand: SS1 × 1
1-Phenylethanol
PDB code: 1um5(H).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG-NAG-BMA-MAN-NAG-GAL-MAN-NAG-FUC × 2
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose, GAL=Beta-D-Galactopyranose, FUC=Alpha-L-Fucopyranose.
PDB codes: 5vgp(A), 7lbl(A).


 
2. Ligand: NAG-NAG-BMA-MAN-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 4qgt(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 3drq(B), 3eo0(B).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3eo0(B).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3eo0(B).

 

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