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Ligand clusters for UniProt code Q68D85

Ligand clusters for Q68D85: Natural cytotoxicity triggering receptor 3 ligand 1 from Homo sapiens

6 ligand clusters
Cluster 1.
2 ligand types
5 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6yjpC  
JSmol
 

Structures

PDB   Schematic diagram
6yjpC    
4zsoE    
3pv7A    
3pv6A    
6yjpD    

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 6yjp(C),


 
2. Ligand: NAG-NAG × 3
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 3pv6(A), 3pv7(A), 4zso(E).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 3pv6(A), 3pv7(A).


 
2. Ligand: NAG-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose.
PDB code: 4zso(E).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 3pv6(A), 3pv7(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code: 3pv7(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code: 6yjp(D).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACY × 1
acetic acid
Acetic acid
PDB code: 4zso(E).

 

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