Ligand clusters for UniProt code Q64823

Ligand clusters for Q64823: Fiber from Human adenovirus D37

		Top 6 (of 10) ligand clusters Cluster 1. 9 ligand types 20 ligands Cluster 2. 2 ligand types 21 ligands Cluster 3. 2 ligand types 3 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 4 ligands
Representative protein: 4k6tA

Structures

PDB		Schematic diagram
4k6tA
1uxeA
2wbwA
2wgtA
2wguA
		more ...

Cluster 1 contains 9 ligand types

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Ligand		Description
		1. Ligand: SIA × 7 N-Acetyl-Alpha-Neuraminic acid PDB codes: 2wbw(A), 3qnd(A), 4k6t(A), 4k6u(A),
		2. Ligand: 18D × 4 3,5-Dideoxy-5-(Propanoylamino)-D-Glycero-Alpha-D- Galacto-Non-2-Ulopyranosonic acid PDB codes: 2wgt(A), 4k6v(A), 4k6w(A).
		3. Ligand: 42D × 2 3,5-Dideoxy-5-[(Methoxycarbonyl)amino]-D-Glycero-Alpha- D-Galacto-Non-2-Ulopyranosonic acid PDB codes: 2wgu(A),
		4. Ligand: GAL-SIA × 2 GAL=Beta-D-Galactopyranose, SIA=N-Acetyl-Alpha-Neuraminic acid. PDB codes: 1uxa(A),
		5. Ligand: 18D-1P0 × 1 18D=3,5-Dideoxy-5-(Propanoylamino)-D-Glycero-Alpha-D- Galacto-Non-2-Ulopyranosonic acid, 1P0=2,2',2''-[Nitrilotris(methanediyl-1h-1,2,3-Triazole-4, 1-Diyl)]triethanol. PDB code: 4k6w(A).
		6. Ligand: 18D-1P4 × 1 18D=3,5-Dideoxy-5-(Propanoylamino)-D-Glycero-Alpha-D- Galacto-Non-2-Ulopyranosonic acid, 1P4=3,3',3''-[Nitrilotris(methanediyl-1h-1,2,3-Triazole-4, 1-Diyl)]tripropan-1-Ol. PDB code: 4k6v(A).
		7. Ligand: 423 × 1 (1-{2-[Bis(2-{4-[({(6r)-5-(Acetylamino)-3,5-Dideoxy-6- [(1r,2r)-1,2,3-Trihydroxypropyl]-Beta-L- Threo-Hex-2- Ulopyranonosyl}oxy)methyl]-1h-1,2,3-Triazol-1- Yl}ethyl)amino]ethyl}-1h-1,2,3- Triazol-4-Yl)methyl (6r)-5-(Acetylamino)-3,5-Dideoxy-6-[(1r,2r)-1,2,3- Trihydroxypropyl]-Beta-L- Threo-Hex-2-Ulopyranosidonic acid PDB code: 4xqa(A).
		8. Ligand: 425 × 1 2-(1-{2-[Bis(2-{4-[2-({(6r)-5-(Acetylamino)-3,5- Dideoxy-6-[(1r,2r)-1,2,3-Trihydroxypropyl]-Beta-L- Threo-Hex-2-Ulopyranonosyl}oxy)ethyl]-1h-1,2,3- Triazol-1-Yl}ethyl)amino]ethyl}-1h-1,2,3-Triazol- 4- Yl)ethyl (6r)-5-(Acetylamino)-3,5-Dideoxy-6-[(1r,2r)- 1,2,3-Trihydroxypropyl]-Beta-L-Threo-Hex- 2- Ulopyranosidonic acid PDB code: 4xqb(A).
		9. Ligand: BGC-GAL-NGA-GAL-SIA-SIA × 1 BGC=Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose, NGA=2-Acetamido-2-Deoxy-Beta-D-Galactopyranose, SIA=N-Acetyl-Alpha-Neuraminic acid. PDB code: 3n0i(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 13 PDB codes: 1uxa(A), 1uxe(A), 2wgt(A), 2wgu(A), 3n0i(A), 3qnd(A), 4k6t(A), 4k6u(A), 4k6v(A), 4k6w(A), 4xqa(A), 4xqb(A).
		2. Ligand: ACT × 8 Acetate ion PDB codes: 1uxa(A), 1uxe(A), 4k6t(A), 4k6v(A), 4k6w(A), 4xqb(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 1 PDB code: 4xqb(A).
		2. Ligand: ACT × 2 Acetate ion PDB codes: 4xqa(A), 4xqb(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4k6t(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4k6t(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: ACT × 4 Acetate ion PDB codes: 4k6v(A), 4k6w(A), 4xqa(A), 4xqb(A).