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Ligand clusters for UniProt code Q63155

Ligand clusters for Q63155: Netrin receptor DCC from Rattus norvegicus

Top 6 (of 13) ligand clusters
Cluster 1.
2 ligand types
4 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3lafA  
JSmol
 

Structures

PDB   Schematic diagram
3lafA    
5z5kA    

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG-NAG × 2
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 5z5k(A),


 
2. Ligand: NAG-NAG-BMA × 2
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose.
PDB codes: 3laf(A),

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code: 3laf(A).


 
2. Ligand: NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 5z5k(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 3laf(A), 5z5k(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3laf(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3laf(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3laf(A).

 

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