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Ligand clusters for UniProt code Q5SKW1

Ligand clusters for Q5SKW1: RNA polymerase sigma factor SigA from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)

Top 6 (of 48) ligand clusters
Cluster 1.
5 ligand types
5 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4g7hF  
JSmol
 

Structures

PDB   Schematic diagram
4g7hF    
6kqdF    
6ltsF    
4oirF    
6kqhF    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: RBT × 1
rifabutin
Rifabutin
PDB code: 2a68(F).


 
2. Ligand: RFV × 1
rifamycin
Rifamycin sv
PDB code: 4oir(F).


 
3. Ligand: RPT × 1
rifapentine
Rifapentine
PDB code: 2a69(F).

_Mg
 
4. Metal: _MG × 1
PDB code: 1smy(F).


 
5. Ligand: _DG × 1
PDB code: 6kqd(F).

 

 Cluster 2 contains 1 ligand type

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Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 1iw7(F).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 1iw7(F).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 1iw7(F).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Mg
 
1. Metal: _MG × 3
PDB codes: 1iw7(F), 1smy(F),

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 1iw7(F).

 

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