Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q5SKW1
Ligand clusters for Q5SKW1: RNA polymerase sigma factor SigA from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Top 6 (of 48) ligand clusters
Cluster 1.
5 ligand types
5 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4g7hF
Structures
PDB
Schematic diagram
4g7h
F
6kqd
F
6lts
F
4oir
F
6kqh
F
more ...
Cluster 1 contains 5 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
RBT × 1
rifabutin
Rifabutin
PDB code:
2a68
(F).
2. Ligand:
RFV × 1
rifamycin
Rifamycin sv
PDB code:
4oir
(F).
3. Ligand:
RPT × 1
rifapentine
Rifapentine
PDB code:
2a69
(F).
_Mg
4. Metal:
_MG × 1
PDB code:
1smy
(F).
5. Ligand:
_DG × 1
PDB code:
6kqd
(F).
Cluster 2 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
1iw7
(F).
Cluster 3 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
1iw7
(F).
Cluster 4 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
1iw7
(F).
Cluster 5 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Mg
1. Metal:
_MG × 3
PDB codes:
1iw7
(F),
1smy
(F),
Cluster 6 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
1iw7
(F).