Ligand clusters for UniProt code Q58718

Ligand clusters for Q58718: DNA double-strand break repair Rad50 ATPase from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

		6 ligand clusters Cluster 1. 2 ligand types 5 ligands Cluster 2. 1 ligand type 2 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 3auyA

Structures

PDB		Schematic diagram
3auyA
5f3wB
5dnyB
3av0B
3auxA

Cluster 1 contains 2 ligand types

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Ligand		Description
		1. Ligand: AGS × 3 Phosphothiophosphoric acid-Adenylate ester PDB codes: 3av0(B), 5dny(B), 5f3w(B).
		2. Ligand: ADP × 2 Adenosine-5'-Diphosphate PDB codes: 3aux(A), 3auy(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: AGS × 2 Phosphothiophosphoric acid-Adenylate ester PDB codes: 5dny(B), 5f3w(B).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3av0(B).
		2. Ligand: IPA × 1 isopropyl alcohol Isopropyl alcohol PDB code: 3av0(B).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3av0(B).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3av0(B).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: IPA × 1 isopropyl alcohol Isopropyl alcohol PDB code: 3av0(B).