Ligand clusters for UniProt code Q54AI1

Ligand clusters for Q54AI1: Heme oxygenase (biliverdin-producing) from Corynebacterium diphtheriae

		Top 6 (of 12) ligand clusters Cluster 1. 11 ligand types 14 ligands Cluster 2. 2 ligand types 2 ligands Cluster 3. 2 ligand types 4 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 4gpcA

Structures

PDB		Schematic diagram
4gpcA
4gphA
3i8rA
4gpfA
3mooA
		more ...

Cluster 1 contains 11 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 4goh(A),
_Fe		2. Metal: _FE × 1 PDB code: 4gpf(A).
		3. Ligand: BLA × 3 Biliverdine IX alpha PDB codes: 4gpc(A), 4gpf(A), 4gph(A).
		4. Ligand: DTV × 1 (2s,3s)-1,4-Dimercaptobutane-2,3-Diol PDB code: 3i8r(A).
		5. Ligand: GLC-FRU × 1 GLC=Alpha-D-Glucopyranose, FRU=Beta-D-Fructofuranose. PDB code: 3moo(A).
		6. Ligand: HEM × 1 Protoporphyrin IX containing fe PDB code: 3i8r(A).
		7. Ligand: SO4 × 1 Sulfate ion PDB code: 4gpf(A).
		8. Ligand: TIL × 1 [2-[5-Carboxyethyl-2-Phenolato(nitrilomethylidyne) ][phenolato]]chromium(III) PDB code: 2z68(A).
		9. Ligand: VEA × 1 5-Oxa-Protoporphyrin IX containing fe PDB code: 3moo(A).
		10. Ligand: YOK × 1 [[2,2'-[4-Carboxyethyl-1,2- Phenylenebis(nitrilomethylidyne)]bis[phenolato]](2-)- N,N',O,O']-Iron PDB code: 1wzd(A).
_Na		11. Metal: _NA × 1 PDB code: 2z68(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4goh(A).
		2. Ligand: SO4 × 1 Sulfate ion PDB code: 1wzd(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4goh(A).
		2. Ligand: SO4 × 3 Sulfate ion PDB codes: 2z68(A), 3moo(A), 4gpf(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 1wzd(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 1wzd(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4goh(A).