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EBI
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PDBsum
Ligand clusters for UniProt code Q51883
Ligand clusters for Q51883: Plastocyanin from Phormidium laminosum
Top 6 (of 8) ligand clusters
Cluster 1.
2 ligand types
6 ligands
Cluster 2.
2 ligand types
5 ligands
Cluster 3.
2 ligand types
7 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
2 ligands
Representative protein: 2w88A
Structures
PDB
Schematic diagram
2w88
A
1baw
A
4r0o
A
3cvd
A
2w8c
A
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 5
PDB codes:
1baw
(A),
2q5b
(A),
2w88
(A),
2w8c
(A),
3cvd
(A).
2. Ligand:
LCY × 1
1-Methylpyrrolidine-2,5-Dione
PDB code:
4r0o
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 4
PDB codes:
1baw
(A),
2q5b
(A),
2w88
(A),
3cvd
(A).
2. Ligand:
ACT × 1
Acetate ion
PDB code:
2q5b
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
_Cu
1. Metal:
_CU × 5
PDB codes:
2q5b
(A),
2w88
(A),
2w8c
(A),
3cvc
(A),
4r0o
(A).
Cu1
2. Metal:
CU1 × 2
PDB codes:
3cvb
(A),
3cvd
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
__K
1. Metal:
__K × 1
PDB code:
2q5b
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
__K
1. Metal:
__K × 1
PDB code:
2q5b
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 2
PDB codes:
2w88
(A),
2w8c
(A).