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Ligand clusters for UniProt code Q3TCN2

Ligand clusters for Q3TCN2: Putative phospholipase B-like 2 from Mus musculus

Top 6 (of 23) ligand clusters
Cluster 1.
3 ligand types
5 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
3 ligand types
7 ligands
Cluster 4.
3 ligand types
5 ligands
Cluster 5.
2 ligand types
3 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 3fgwA  
JSmol
 

Structures

PDB   Schematic diagram
3fgwA    
3fbxA    
3fgtB    
3fgrB    
3fgtA    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3fgr(A).


 
2. Ligand: NAG-NAG × 3
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 3fbx(A), 3fgr(A), 3fgt(A).


 
3. Ligand: NAG-NAG-BMA × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose.
PDB code: 3fgw(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 3
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 3fbx(A), 3fgt(B), 3fgw(A).


 
2. Ligand: NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 3fgr(B).

 

 Cluster 3 contains 3 ligand types

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Ligand Description


 
1. Ligand: NAG × 4
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 3fbx(A), 3fgr(A), 3fgt(A), 3fgw(A).


 
2. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 3fgr(A),


 
3. Ligand: PG4 × 1
Tetraethylene glycol
PDB code: 3fbx(A).

 

 Cluster 4 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 3fbx(A), 3fgr(B), 3fgt(B).


 
2. Ligand: 7PE × 1
2-(2-(2-(2-(2-(2-Ethoxyethoxy)ethoxy)ethoxy)ethoxy) ethoxy)ethanol
PDB code: 3fgt(B).


 
3. Ligand: ACT × 1
Acetate ion
PDB code: 3fgr(B).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 3fgr(A),


 
2. Ligand: PGE × 1
Triethylene glycol
PDB code: 3fbx(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 3fbx(A), 3fgr(B).

 

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