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EBI
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PDBsum
Ligand clusters for UniProt code Q3TCN2
Ligand clusters for Q3TCN2: Putative phospholipase B-like 2 from Mus musculus
Top 6 (of 23) ligand clusters
Cluster 1.
3 ligand types
5 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
3 ligand types
7 ligands
Cluster 4.
3 ligand types
5 ligands
Cluster 5.
2 ligand types
3 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 3fgwA
Structures
PDB
Schematic diagram
3fgw
A
3fbx
A
3fgt
B
3fgr
B
3fgt
A
more ...
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3fgr
(A).
2. Ligand:
NAG-NAG × 3
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes:
3fbx
(A),
3fgr
(A),
3fgt
(A).
3. Ligand:
NAG-NAG-BMA × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose.
PDB code:
3fgw
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG × 3
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
3fbx
(A),
3fgt
(B),
3fgw
(A).
2. Ligand:
NAG-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
3fgr
(B).
Cluster 3 contains 3 ligand types
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Ligand
Description
1. Ligand:
NAG × 4
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
3fbx
(A),
3fgr
(A),
3fgt
(A),
3fgw
(A).
2. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
3fgr
(A),
3. Ligand:
PG4 × 1
Tetraethylene glycol
PDB code:
3fbx
(A).
Cluster 4 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
3fbx
(A),
3fgr
(B),
3fgt
(B).
2. Ligand:
7PE × 1
2-(2-(2-(2-(2-(2-Ethoxyethoxy)ethoxy)ethoxy)ethoxy) ethoxy)ethanol
PDB code:
3fgt
(B).
3. Ligand:
ACT × 1
Acetate ion
PDB code:
3fgr
(B).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
3fgr
(A),
2. Ligand:
PGE × 1
Triethylene glycol
PDB code:
3fbx
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
3fbx
(A),
3fgr
(B).