Ligand clusters for UniProt code Q29122

Ligand clusters for Q29122: Unconventional myosin-VI from Sus scrofa

		Top 6 (of 32) ligand clusters Cluster 1. 9 ligand types 18 ligands Cluster 2. 3 ligand types 3 ligands Cluster 3. 3 ligand types 9 ligands Cluster 4. 3 ligand types 5 ligands Cluster 5. 3 ligand types 3 ligands Cluster 6. 3 ligand types 6 ligands
Representative protein: 4anjA

Structures

PDB		Schematic diagram
4anjA
4dbpA
3l9iA
2bkhA
2bkiA
		more ...

Cluster 1 contains 9 ligand types

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Ligand		Description
_Mg		1. Metal: _MG × 6 PDB codes: 2v26(A), 2vas(A), 2vb6(A), 4anj(A), 4dbq(A), 5o2l(A).
		2. Ligand: GOL × 1 glycerin Glycerol PDB code: 2x51(A).
		3. Ligand: ADP-BEF × 3 BEF=Beryllium trifluoride ion, ADP=Adenosine-5'-Diphosphate. PDB codes: 2vas(A), 2vb6(A), 4dbq(A).
		4. Ligand: ADP × 2 Adenosine-5'-Diphosphate PDB codes: 4anj(A), 5o2l(A).
		5. Ligand: SO4 × 2 Sulfate ion PDB codes: 2bki(A), 2x51(A).
		6. Ligand: ADP-VO4 × 1 VO4=Vanadate ion, ADP=Adenosine-5'-Diphosphate. PDB code: 2v26(A).
		7. Ligand: ALF × 1 Tetrafluoroaluminate ion PDB code: 4anj(A).
		8. Ligand: BEF × 1 Beryllium trifluoride ion PDB code: 5o2l(A).
		9. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4dbp(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 2bkh(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4dbp(A).
		3. Ligand: SO4 × 1 Sulfate ion PDB code: 2v26(A).

Cluster 3 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 4 glycerin Glycerol PDB codes: 2bkh(A), 2x51(A),
		2. Ligand: EDO × 3 1,2-Ethanediol PDB codes: 2v26(A), 4dbp(A).
		3. Ligand: TBU × 2 Tertiary-Butyl alcohol PDB codes: 3l9i(A), 4dbp(A).

Cluster 4 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 2bkh(A), 2x51(A).
		2. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 2v26(A),
		3. Ligand: PO4 × 1 Phosphate ion PDB code: 3l9i(A).

Cluster 5 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 5o2l(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4dbp(A).
		3. Ligand: PO4 × 1 Phosphate ion PDB code: 3l9i(A).

Cluster 6 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 4 glycerin Glycerol PDB codes: 2bkh(A), 2x51(A), 5o2l(A),
		2. Ligand: IPA × 1 isopropyl alcohol Isopropyl alcohol PDB code: 4dbp(A).
		3. Ligand: ACT × 1 Acetate ion PDB code: 3l9i(A).