Ligand clusters for UniProt code Q14126

Ligand clusters for Q14126: Desmoglein-2 from Homo sapiens

		Top 6 (of 14) ligand clusters Cluster 1. 2 ligand types 2 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 2 ligand types 2 ligands Cluster 4. 2 ligand types 2 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 2 ligands
Representative protein: 5erdA

Structures

PDB		Schematic diagram
5erdA
5j5jA
6sitD

Cluster 1 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG-NAG-BMA-FUC × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, FUC=Alpha-L-Fucopyranose. PDB code: 5erd(A).
		2. Ligand: NAG-NAG-BMA-MAN-MAN-FUC × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose, FUC=Alpha-L-Fucopyranose. PDB code: 5j5j(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: NAG-NAG-BMA-MAN-NAG-GAL-MAN-NAG × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose, GAL=Beta-D-Galactopyranose. PDB code: 5j5j(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 5j5j(A).
		2. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 5erd(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 5erd(A).
		2. Ligand: NAG-NAG × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB code: 5j5j(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 5erd(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: NAG × 2 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 5erd(A), 5j5j(A).