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Ligand clusters for UniProt code Q13635

Ligand clusters for Q13635: Protein patched homolog 1 OS=Homo sapiens OX=9606 GN=PTCH1 PE=1 SV=2

Top 6 (of 14) ligand clusters
Cluster 1.
2 ligand types
8 ligands
Cluster 2.
2 ligand types
9 ligands
Cluster 3.
2 ligand types
5 ligands
Cluster 4.
2 ligand types
12 ligands
Cluster 5.
2 ligand types
13 ligands
Cluster 6.
2 ligand types
14 ligands
Representative protein: 6rmgA  
JSmol
 

Structures

PDB   Schematic diagram
6rmgA    
6dmoA    
6rvdA    
6n7hA    
6n7gA    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: CLR × 4
cholesterol
Cholesterol
PDB codes: 6n7g(A), 6n7h(A), 6n7k(A), 6rvd(A).


 
2. Ligand: Y01 × 4
Cholesterol hemisuccinate
PDB codes: 6dmb(A), 6dmy(A), 6rmg(A), 6rtw(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: CLR × 4
cholesterol
Cholesterol
PDB codes: 6n7g(A), 6n7h(A), 6n7k(A), 6rvd(A).


 
2. Ligand: Y01 × 5
Cholesterol hemisuccinate
PDB codes: 6dmb(A), 6dmy(A), 6rmg(A),

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: CLR × 3
cholesterol
Cholesterol
PDB codes: 6n7g(A), 6n7h(A), 6n7k(A).


 
2. Ligand: PLM × 2
palmitic acid
Palmitic acid
PDB codes: 6d4j(A), 6rvd(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 9
n-acetylglucosamine
N-Acetyl-D-Glucosamine
PDB codes: 6d4j(A), 6dmb(A), 6dmo(A), 6dmy(A), 6n7g(A), 6n7h(A), 6n7k(A), 6rmg(A), 6rvd(A).


 
2. Ligand: NAG-NAG × 3
NAG=N-Acetyl-D-Glucosamine.
PDB codes: 6d4h(A), 6oeu(A), 6oev(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 11
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 6dmb(A), 6dmo(A), 6dmy(A), 6n7g(A), 6n7h(A), 6n7k(A), 6rmg(A), 6rtw(A), 6rtx(A), 6rty(A), 6rvd(A).


 
2. Ligand: NAG-NAG × 2
NAG=N-Acetyl-D-Glucosamine.
PDB codes: 6d4h(A), 6oeu(A).

 

 Cluster 6 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 10
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 6dmb(A), 6dmo(A), 6dmy(A), 6n7g(A), 6n7h(A), 6n7k(A), 6rmg(A), 6rtw(A), 6rty(A), 6rvd(A).


 
2. Ligand: NAG-NAG × 4
NAG=N-Acetyl-D-Glucosamine.
PDB codes: 6d4h(A), 6d4j(A), 6oeu(A), 6oev(A).

 

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