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Ligand clusters for UniProt code Q13370

Ligand clusters for Q13370: cGMP-inhibited 3',5'-cyclic phosphodiesterase B from Homo sapiens

5 ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
4 ligands
Cluster 5.
1 ligand type
1 ligand
Representative protein: 1sojA  
JSmol
 

Structures

PDB   Schematic diagram
1sojA    
1so2A    

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: 666 × 1
6-(4-{[2-(3-Iodobenzyl)-3-Oxocyclohex-1-En-1- Yl]amino}phenyl)-5-Methyl-4,5-Dihydropyridazin-3(2h)-
One
PDB code: 1so2(A).


 
2. Ligand: IBM × 1
3-Isobutyl-1-Methylxanthine
PDB code: 1soj(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: HG9 × 1
1-Deoxy-1-[(2-Hydroxyethyl)(nonanoyl)amino]hexitol
PDB code: 1so2(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: HG9 × 1
1-Deoxy-1-[(2-Hydroxyethyl)(nonanoyl)amino]hexitol
PDB code: 1so2(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Mg
 
1. Metal: _MG × 4
PDB codes: 1so2(A), 1soj(A),

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 1so2(A).

 

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