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Ligand clusters for UniProt code P9WHJ3

Ligand clusters for P9WHJ3: Protein RecA from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

Top 6 (of 14) ligand clusters
Cluster 1.
7 ligand types
24 ligands
Cluster 2.
2 ligand types
6 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
8 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 1mo4A  
JSmol
 

Structures

PDB   Schematic diagram
1mo4A    
1g19A    
4ppqA    
4ppgA    
4pskA    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: GOL × 11
glycerin
Glycerol
PDB codes: 4oqf(A), 4po1(A), 4po8(A), 4po9(A), 4poa(A), 4pqf(A), 4pqr(A), 4pqy(A), 4pr0(A), 4psa(A), 4ptl(A).


 
2. Ligand: FLC × 4
Citrate anion
PDB codes: 4ppf(A), 4ppg(A), 4ppn(A), 4ppq(A).


 
3. Ligand: PO4 × 3
Phosphate ion
PDB codes: 1g19(A), 4psk(A), 4psv(A).


 
4. Ligand: AGS × 2
Phosphothiophosphoric acid-Adenylate ester
PDB codes: 1mo4(A), 1mo5(A).


 
5. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 4ppn(A), 4ppq(A).


 
6. Ligand: ADP × 1
Adenosine-5'-Diphosphate
PDB code: 1mo3(A).


 
7. Ligand: ALF-ADP × 1
ALF=Tetrafluoroaluminate ion, ADP=Adenosine-5'-Diphosphate.
PDB code: 1g18(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 5
1,2-Ethanediol
PDB codes: 4oqf(A), 4po8(A), 4poa(A), 4pqf(A), 4psa(A).

_Na
 
2. Metal: _NA × 1
PDB code: 4ppf(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4oqf(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 8
1,2-Ethanediol
PDB codes: 4po8(A), 4poa(A), 4ppf(A), 4pqr(A), 4pr0(A), 4psa(A),

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 4po9(A), 4psa(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 3
1,2-Ethanediol
PDB codes: 4po9(A), 4ppf(A), 4psa(A).

 

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