Ligand clusters for UniProt code P63165

Ligand clusters for P63165: Small ubiquitin-related modifier 1 from Homo sapiens

		Top 6 (of 9) ligand clusters Cluster 1. 10 ligand types 13 ligands Cluster 2. 6 ligand types 6 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 2 ligand types 2 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 1y8rC

Structures

PDB		Schematic diagram
1y8rC
1wywB
3kycD
6v7qC
1tgzB
		more ...

Cluster 1 contains 10 ligand types

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Ligand		Description
_Mg		1. Metal: _MG × 1 PDB code: 1wyw(B).
_Zn		2. Metal: _ZN × 1 PDB code: 6ww3(A).
		3. Ligand: ALA-GLU-GLU-ARG-ILE-ILE-VAL-LEU × 3 PDB codes: 6uyx(C), 6uyz(A),
		4. Ligand: SEP × 2 Phosphoserine PDB codes: 6uyu(A), 6uyz(C).
		5. Ligand: ALA-GLU-GLU-ARG-ILE-ILE-SER-LEU-ASP × 1 PDB code: 6v7p(C).
		6. Ligand: ARG-ILE-ILE-SER-LEU-ASP × 1 PDB code: 6v7r(A).
		7. Ligand: GLU-ALA-GLU-GLU-ARG-ILE-ILE-SEP-LEU-ASP × 1 SEP=Phosphoserine. PDB code: 6v7s(A).
		8. Ligand: GLU-GLU-ARG-ILE-ILE-SEP-LEU-ASP × 1 SEP=Phosphoserine. PDB code: 6v7q(C).
		9. Ligand: GLY-GLU-ALA-GLU-GLU-ARG-ILE-ILE-SEP-LEU × 1 SEP=Phosphoserine. PDB code: 6v7s(C).
		10. Ligand: GLY-GLU-ALA-GLU-GLU-ARG-ILE-ILE-SER-LEU × 1 PDB code: 6v7r(C).

Cluster 2 contains 6 ligand types

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Ligand		Description
		1. Ligand: ATP × 1 Adenosine-5'-Triphosphate PDB code: 1y8r(C).
		2. Ligand: JZU × 1 5'-Deoxy-5'-(Sulfamoylamino)adenosine PDB code: 3kyc(D).
		3. Ligand: VAY × 1 {(1r,2r,3s,4r)-4-[(5-{4-[(1s)-1-(6-Bromopyridin-2-Yl)- 1-Hydroxyethyl]thiophene-2- Carbonyl}pyrimidin-4-Yl) amino]-2,3-Dihydroxycyclopentyl}methyl sulfamate PDB code: 6xog(C).
		4. Ligand: VB7 × 1 {(1r,2s,4r)-4-[(5-{4-[(1r)-3,4-Dihydro-1h-2-Benzopyran- 1-Yl]thiophene-2-Carbonyl}pyrimidin-4- Yl)amino]-2- Hydroxycyclopentyl}methyl sulfamate PDB code: 6xoh(C).
		5. Ligand: VBA × 1 [(1r,2r,3s,4r)-4-{[5-(1-Benzyl-1h-Pyrazole-3-Carbonyl) pyrimidin-4-Yl]amino}-2,3- Dihydroxycyclopentyl]methyl sulfamate PDB code: 6xoi(C).
		6. Ligand: VMX × 1 5'-{[(3-Aminopropyl)sulfonyl]amino}-5'-Deoxyadenosine PDB code: 3kyd(D).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: ALA-GLU-GLU-ARG-VAL-VAL-VAL-ILE-SEP-SEP × 1 SEP=Phosphoserine. PDB code: 6uyu(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 3kyd(D).
		2. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 6ww3(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 1tgz(B).

Cluster 6 contains 1 ligand type

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Ligand		Description
_Na		1. Metal: _NA × 1 PDB code: 1wyw(B).