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Ligand clusters for UniProt code P59665

Ligand clusters for P59665: Neutrophil defensin 1 from Homo sapiens

Top 6 (of 8) ligand clusters
Cluster 1.
4 ligand types
7 ligands
Cluster 2.
4 ligand types
5 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3gnyA  
JSmol
 

Structures

PDB   Schematic diagram
3gnyA    
3h6cA    
3lo1A    
3lo4A    
3loeA    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4du0(A).


 
2. Ligand: PEG × 4
Di(hydroxyethyl)ether
PDB codes: 3h6c(A), 3lo4(A),


 
3. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 3lo2(A).


 
4. Ligand: PG0 × 1
2-(2-Methoxyethoxy)ethanol
PDB code: 3lo1(A).

 

 Cluster 2 contains 4 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 3gny(A), 3loe(A).


 
2. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 3lo2(A).


 
3. Ligand: TFA × 1
Trifluoroacetic acid
PDB code: 3lo2(A).

_Cl
 
4. Metal: _CL × 1
PDB code: 4lbb(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3lvx(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4du0(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3loe(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3lvx(A).

 

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