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EBI
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Ligand clusters for UniProt code P55818
Ligand clusters for P55818: Bifunctional protein MdtA from Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)
Top 6 (of 14) ligand clusters
Cluster 1.
5 ligand types
10 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6tlkA
Structures
PDB
Schematic diagram
6tlk
A
1lua
A
6tm3
A
6tge
A
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
NAP × 1
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB code:
1lua
(A).
2. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6tlk
(A).
3. Ligand:
NAP × 3
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB codes:
6tge
(A),
6tlk
(A),
6tm3
(A).
4. Ligand:
H4M × 3
5,10-Dimethylene tetrahydromethanopterin
PDB codes:
6tge
(A),
6tlk
(A),
6tm3
(A).
5. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
6tm3
(A),
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6tm3
(A).
2. Ligand:
H4M × 1
5,10-Dimethylene tetrahydromethanopterin
PDB code:
6tge
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAP × 1
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB code:
6tlk
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6tm3
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6tge
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6tm3
(A).