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Ligand clusters for UniProt code P55818

Ligand clusters for P55818: Bifunctional protein MdtA from Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)

Top 6 (of 14) ligand clusters
Cluster 1.
5 ligand types
10 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6tlkA  
JSmol
 

Structures

PDB   Schematic diagram
6tlkA    
1luaA    
6tm3A    
6tgeA    

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: NAP × 1
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB code: 1lua(A).


 
2. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6tlk(A).


 
3. Ligand: NAP × 3
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB codes: 6tge(A), 6tlk(A), 6tm3(A).


 
4. Ligand: H4M × 3
5,10-Dimethylene tetrahydromethanopterin
PDB codes: 6tge(A), 6tlk(A), 6tm3(A).


 
5. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 6tm3(A),

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6tm3(A).


 
2. Ligand: H4M × 1
5,10-Dimethylene tetrahydromethanopterin
PDB code: 6tge(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAP × 1
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB code: 6tlk(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6tm3(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 6tge(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6tm3(A).

 

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