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EBI
Databases
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PDBsum
Ligand clusters for UniProt code P54958
Ligand clusters for P54958: Aspartic protease Bla g 2 from Blattella germanica
Top 6 (of 13) ligand clusters
Cluster 1.
2 ligand types
4 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1yg9A
Structures
PDB
Schematic diagram
1yg9
A
3liz
A
4rld
A
2nr6
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG-NAG × 3
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes:
1yg9
(A),
2nr6
(A),
4rld
(A).
2. Ligand:
NAG-NAG-BMA-MAN × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB code:
3liz
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 3
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
1yg9
(A),
2nr6
(A),
3liz
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3liz
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3liz
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3liz
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3liz
(A).