spacer
spacer

Ligand clusters for UniProt code P28314

Ligand clusters for P28314: Peroxidase from Coprinopsis cinerea

Top 6 (of 10) ligand clusters
Cluster 1.
1 ligand type
5 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1ly8A  
JSmol
 

Structures

PDB   Schematic diagram
1ly8A    
1lykA    
1h3jA    
1lycA    
1ly9A    

 

 Cluster 1 contains 1 ligand type

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: HEM × 5
Protoporphyrin IX containing fe
PDB codes: 1h3j(A), 1ly8(A), 1ly9(A), 1lyc(A), 1lyk(A).

 

 Cluster 2 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 1ly8(A), 1lyk(A).


 
2. Ligand: NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 1h3j(A).

 

 Cluster 3 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: BMA × 2
Beta-D-Mannopyranose
PDB codes: 1h3j(A), 1lyk(A).


 
2. Ligand: MAN × 1
Alpha-D-Mannopyranose
PDB code: 1ly8(A).

 

 Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: BMA × 1
Beta-D-Mannopyranose
PDB code: 1ly8(A).

 

 Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1ly8(A).

 

 Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1ly8(A).

 

spacer

spacer