Ligand clusters for UniProt code P25054

Ligand clusters for P25054: Adenomatous polyposis coli protein from Homo sapiens

		Top 6 (of 14) ligand clusters Cluster 1. 8 ligand types 9 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 4 ligand types 5 ligands Cluster 4. 2 ligand types 2 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 5iz8A

Structures

PDB		Schematic diagram
5iz8A
3t7uA
4yjlA
4yjeA
3nmwA
		more ...

Cluster 1 contains 8 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: ACE-ALA-GLY-GLU-ALA-LEU-ALA-ASP-NH2 × 2 ACE=Acetyl group, NH2=Amino group. PDB codes: 5iz8(A),
		2. Ligand: ACE-GLY-GLY-GLU-ALA-LEU-ALA-ASP-NH2 × 1 ACE=Acetyl group, NH2=Amino group. PDB code: 5iz9(A).
		3. Ligand: ACE-GLY-GLY-GLU-ALA-LEU-ALA-TRP-NH2 × 1 ACE=Acetyl group, NH2=Amino group. PDB code: 5iza(A).
		4. Ligand: LEU-THR-GLY-CYS-GLY-ASP-ILE-ILE-ALA-GLU × 1 PDB code: 4yje(A).
		5. Ligand: PHQ-ALA-GLY-GLU-ALA-LEU-TYR-GLU-NH2 × 1 PHQ=Benzyl chlorocarbonate, NH2=Amino group. PDB code: 5iz6(A).
		6. Ligand: PHQ-ALA-GLY-GLU-ALA-XYC-TYR-GLU-NH2 × 1 PHQ=Benzyl chlorocarbonate, XYC=(2~{s})-2-Azanyl-3-Cyclopentyl-Propanoic acid, NH2=Amino group. PDB code: 5b6g(A).
		7. Ligand: PHQ-ALA-GLY-GLU-SER-LEU-TYR-GLU-NH2 × 1 PHQ=Benzyl chlorocarbonate, NH2=Amino group. PDB code: 5z8h(A).
		8. Ligand: SER-TYR-GLU-GLY-TYR-GLU-GLY-TYR-TYR-SER × 1 PDB code: 3qhe(A).

Cluster 2 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: ACE-ALA-GLY-GLU-ALA-LEU-ALA-ASP-NH2 × 1 ACE=Acetyl group, NH2=Amino group. PDB code: 5iz8(B).

Cluster 3 contains 4 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 5b6g(A), 5z8h(A).
		2. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 5iz6(A).
		3. Ligand: PO4 × 1 Phosphate ion PDB code: 3t7u(A).
		4. Ligand: SO4 × 1 Sulfate ion PDB code: 3nmw(A).

Cluster 4 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4yjl(A).
		2. Ligand: PGE × 1 Triethylene glycol PDB code: 5iz8(A).

Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 5z8h(A).

Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: PO4 × 1 Phosphate ion PDB code: 3t7u(A).