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Ligand clusters for UniProt code P23946

Ligand clusters for P23946: Chymase from Homo sapiens

Top 6 (of 18) ligand clusters
Cluster 1.
17 ligand types
17 ligands
Cluster 2.
2 ligand types
11 ligands
Cluster 3.
2 ligand types
7 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1kltA  
JSmol
 

Structures

PDB   Schematic diagram
1kltA    
1t31A    
4afzA    
4ag1A    
4k60A    
 more ...

 

 Cluster 1 contains 17 ligand types

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Ligand Description


 
1. Ligand: 0BB × 1
4-{3-[(4-Methyl-1-Benzothiophen-3-Yl)methyl]-2-Oxo-2,3- Dihydro-1h-Benzimidazol-1-Yl}butanoic acid
PDB code: 3s0n(A).


 
2. Ligand: 1P7 × 1
6-Chloro-2,3-Dihydro-1h-Isoindol-1-One
PDB code: 4k5z(A).


 
3. Ligand: 1P8 × 1
6-Bromo-1,3-Dihydro-2h-Indol-2-One
PDB code: 4k60(A).


 
4. Ligand: 1P9 × 1
(3s)-3-{3-[(6-Bromo-2-Oxo-2,3-Dihydro-1h-Indol-4-Yl) methyl]-2-Oxo-2,3-Dihydro-1h-Benzimidazol-1-
Yl}hexanoic acid
PDB code: 4k69(A).


 
5. Ligand: 8W3 × 1
2-Amino-4-((R)-1-((R,Z)-6-(5-Chloro-2-Methoxybenzyl)-7- Oxo-3-(Phenoxyimino)-1,4-Diazepane-1-
Carboxamido) propyl)benzoic acid
PDB code: 5yjm(A).


 
6. Ligand: 8W6 × 1
4-((R)-1-((R,Z)-6-(5-Chloro-2-Methoxybenzyl)-3- (Ethoxyimino)-7-Oxo-1,4-Diazepane-1-
Carboxamido) propyl)benzoic acid
PDB code: 5yjp(A).


 
7. Ligand: ALA-ALA-PRO-HPH-0QE × 1
HPH=(2s)-2-Amino-3-Phenylpropane-1,1-Diol, 0QE=Chloromethane.
PDB code: 1pjp(A).


 
8. Ligand: DRX × 1
[(1s)-1-(5-Chloro-1-Benzothien-3-Yl)-2-(2- Naphthylamino)-2-Oxoethyl]phosphonic acid
PDB code: 2hvx(A).


 
9. Ligand: ES2 × 1
6-Chloro-1,3-Dihydro-2h-Indol-2-One
PDB code: 4k2y(A).


 
10. Ligand: KPK × 1
4-({1-[(4-Methyl-1-Benzothiophen-3-Yl)methyl]-1h- Benzimidazol-2-Yl}sulfanyl)butanoic acid
PDB code: 4kp0(A).


 
11. Ligand: LMR × 1
(2s)-2-Hydroxybutanedioic acid
PDB code: 4ag2(A).


 
12. Ligand: N7O × 1
(S)-[(1s)-1-(5-Chloro-1-Benzothiophen-3-Yl)-2-{[(E)-2- (3,4-Difluorophenyl)ethenyl]amino}-2-
Oxoethyl]methylphosphinic acid
PDB code: 3n7o(A).


 
13. Ligand: OHH × 1
2-[3-({Methyl[1-(2-Naphthoyl)piperidin-4- Yl]amino}carbonyl)-2-Naphthyl]-1-(1-Naphthyl)-2-
Oxoethylphosphonic acid
PDB code: 1t31(A).


 
14. Ligand: PMS × 1
Benzylsulfinic acid
PDB code: 1klt(A).


 
15. Ligand: PO4 × 1
Phosphate ion
PDB code: 4afs(A).


 
16. Ligand: SO4 × 1
Sulfate ion
PDB code: 1t31(A).


 
17. Ligand: TAR × 1
D(-)-Tartaric acid
PDB code: 4afz(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 8
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 1pjp(A), 3s0n(A), 4k2y(A), 4k5z(A), 4k60(A), 4k69(A), 5yjm(A), 5yjp(A).


 
2. Ligand: NAG-NAG × 3
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 1nn6(A), 1t31(A), 3n7o(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 6
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 1nn6(A), 1pjp(A), 1t31(A), 3s0n(A), 5yjm(A), 5yjp(A).


 
2. Ligand: NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 3n7o(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1t31(A).


 
2. Ligand: UNL × 1
Unknown ligand
PDB code: 3n7o(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: MES × 1
2-(N-Morpholino)-Ethanesulfonic acid
PDB code: 1t31(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: MES × 1
2-(N-Morpholino)-Ethanesulfonic acid
PDB code: 4ag2(A).

 

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