Ligand clusters for UniProt code P22887

Ligand clusters for P22887: Nucleoside diphosphate kinase, cytosolic from Dictyostelium discoideum

		3 ligand clusters Cluster 1. 17 ligand types 18 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 1 ligand type 1 ligand
Representative protein: 4c6aA

Structures

PDB		Schematic diagram
4c6aA
1hhqA
1lwxA
4cp5A
1ndpA
		more ...

Cluster 1 contains 17 ligand types

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Ligand		Description
		1. Ligand: ADP × 2 Adenosine-5'-Diphosphate PDB codes: 1b4s(A), 1ndp(A).
		2. Ligand: TYD × 1 Thymidine-5'-Diphosphate PDB code: 1ndc(A).
		3. Ligand: D4T × 1 2',3'-Dehydro-2',3'-Deoxy-Thymidine 5'-Triphosphate PDB code: 1f3f(A).
		4. Ligand: 3AN × 1 3'-Deoxy 3'-Amino adenosine-5'-Diphosphate PDB code: 1hiy(A).
		5. Ligand: FUP × 1 2',3'-Dideoxy-3'-Fluoro-Urididine-5'-Diphosphate PDB code: 1b99(A).
		6. Ligand: TBD × 1 2-Deoxy-Thymidine-5-Alpha borano diphosphate (isomer rp) PDB code: 1f6t(A).
		7. Ligand: RTP × 1 Ribavirin triphosphate PDB code: 1mn9(A).
		8. Ligand: AZD × 1 3'-Azido-3'-Deoxythymidine-5'-Diphosphate PDB code: 1lwx(A).
		9. Ligand: ABT × 1 3'-Azido-3'-Deoxy-Thymidine-5'-Alpha borano triphosphate PDB code: 1mn7(A).
		10. Ligand: PPS × 1 3'-Phosphate-Adenosine-5'-Phosphate sulfate PDB code: 1bux(A).
		11. Ligand: SON × 1 Adenosine phosphonoacetic acid PDB code: 1s5z(A).
		12. Ligand: PO4 × 1 Phosphate ion PDB code: 1b4s(A).
		13. Ligand: AF3-ADP × 1 AF3=Aluminum fluoride, ADP=Adenosine-5'-Diphosphate. PDB code: 1kdn(A).
		14. Ligand: BEF-ADP × 1 BEF=Beryllium trifluoride ion, ADP=Adenosine-5'-Diphosphate. PDB code: 2bef(A).
		15. Ligand: EOI × 1 [[(2r)-1-(6-Aminopurin-9-Yl)propan-2-Yl]oxymethyl- Sulfanyl- Phosphoryl] phosphono hydrogen phosphate PDB code: 4cp5(A).
		16. Ligand: SO4 × 1 Sulfate ion PDB code: 1hhq(A).
		17. Ligand: TNM × 1 [(2r)-1-(6-Aminopurin-9-Yl)propan-2-Yl]oxymethyl- Phosphonooxy-Phosphinic acid PDB code: 3fkb(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 4c6a(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 3fkb(A).