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EBI
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PDBsum
Ligand clusters for UniProt code P11766
Ligand clusters for P11766: Alcohol dehydrogenase class-3 from Homo sapiens
Top 6 (of 8) ligand clusters
Cluster 1.
10 ligand types
23 ligands
Cluster 2.
3 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
2 ligand types
8 ligands
Cluster 6.
1 ligand type
7 ligands
Representative protein: 1m6hA
Structures
PDB
Schematic diagram
1m6h
A
1teh
A
2fzw
A
1mc5
A
1mp0
A
more ...
Cluster 1 contains 10 ligand types
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Ligand
Description
1. Ligand:
NAD × 5
Nicotinamide-Adenine-Dinucleotide
PDB codes:
1ma0
(A),
1mc5
(A),
1mp0
(A),
1teh
(A),
2fzw
(A).
2. Ligand:
AHE × 1
2-Amino-4-[1-Carboxymethyl-Carbamoyl)-2- Hydroxymethylsulfanyl-Ethylcarbamoyl]-Butyric acid
PDB code:
1mc5
(A).
_Zn
3. Metal:
_ZN × 9
PDB codes:
1m6h
(A),
1m6w
(A),
1ma0
(A),
1mc5
(A),
1mp0
(A),
1teh
(A),
2fze
(A),
2fzw
(A),
3qj5
(A).
4. Ligand:
DAO × 1
lauric acid
Lauric acid
PDB code:
1ma0
(A).
5. Ligand:
APR × 1
Adenosine-5-Diphosphoribose
PDB code:
2fze
(A).
6. Ligand:
12H × 1
12-Hydroxydodecanoic acid
PDB code:
1m6w
(A).
7. Ligand:
PO4 × 2
Phosphate ion
PDB codes:
1m6h
(A),
1m6w
(A).
8. Ligand:
NAD × 1
Nicotinamide-Adenine-Dinucleotide
PDB code:
3qj5
(A).
9. Ligand:
022 × 1
3-{1-(4-Carbamoyl-2-Methylphenyl)-5-[4-(1h-Imidazol-1- Yl)phenyl]-1h-Pyrrol-2-Yl}propanoic acid
PDB code:
3qj5
(A).
10. Ligand:
N2P × 1
Pentane-1,5-Diamine
PDB code:
3qj5
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
DAO × 1
lauric acid
Lauric acid
PDB code:
1ma0
(A).
2. Ligand:
12H × 1
12-Hydroxydodecanoic acid
PDB code:
1m6w
(A).
3. Ligand:
022 × 1
3-{1-(4-Carbamoyl-2-Methylphenyl)-5-[4-(1h-Imidazol-1- Yl)phenyl]-1h-Pyrrol-2-Yl}propanoic acid
PDB code:
3qj5
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
1PE × 1
Pentaethylene glycol
PDB code:
3qj5
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
1PE × 1
Pentaethylene glycol
PDB code:
3qj5
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code:
3qj5
(A).
2. Ligand:
PO4 × 7
Phosphate ion
PDB codes:
1m6h
(A),
1m6w
(A),
1ma0
(A),
1mc5
(A),
1mp0
(A),
2fze
(A),
2fzw
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
PO4 × 7
Phosphate ion
PDB codes:
1m6h
(A),
1m6w
(A),
1ma0
(A),
1mc5
(A),
1mp0
(A),
2fze
(A),
2fzw
(A).