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Ligand clusters for UniProt code P10964

Ligand clusters for P10964: DNA-directed RNA polymerase I subunit RPA190 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

6 ligand clusters
Cluster 1.
2 ligand types
10 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
31 ligands
Cluster 6.
1 ligand type
30 ligands
Representative protein: 4c3hA  
JSmol
 

Structures

PDB   Schematic diagram
4c3hA    
5m3mA    
5lmxA    
5g5lA    
5m5wA    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 7
PDB codes: 5m3f(A), 5n61(A), 6h67(A), 6hko(A), 6hlq(A), 6hlr(A), 6tps(A).


 
2. Ligand: G2P × 3
Phosphomethylphosphonic acid guanylate ester
PDB codes: 6hko(A), 6hlq(A), 6hlr(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 4c3i(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 4c3i(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 4c3i(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 31
PDB codes: 4c2m(A), 4c3h(A), 4c3i(A), 4c3j(A), 5g5l(A), 5lmx(A), 5m3f(A), 5m3m(A), 5m5w(A), 5m5x(A), 5m5y(A), 5m64(A), 5n5y(A), 5n5z(A), 5n60(A), 5n61(A), 5oa1(A), 5w5y(A), 5w64(A), 5w65(A), 5w66(A), 6h67(A), 6h68(A), 6hko(A), 6hlq(A), 6hlr(A), 6hls(A), 6rqt(A), 6ruo(A), 6rwe(A), 6tps(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 30
PDB codes: 4c2m(A), 4c3h(A), 4c3i(A), 4c3j(A), 5g5l(A), 5lmx(A), 5m3f(A), 5m3m(A), 5m5w(A), 5m5x(A), 5m5y(A), 5m64(A), 5n5y(A), 5n5z(A), 5n60(A), 5n61(A), 5oa1(A), 5w5y(A), 5w64(A), 5w65(A), 5w66(A), 6h67(A), 6h68(A), 6hko(A), 6hlq(A), 6hlr(A), 6hls(A), 6rqt(A), 6ruo(A), 6rwe(A).

 

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