Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P0C6Y5
Ligand clusters for P0C6Y5: Replicase polyprotein 1ab OS=Porcine transmissible gastroenteritis coronavirus (strain Purdue) OX=11151 GN=rep PE=1 SV=1
Top 6 (of 9) ligand clusters
Cluster 1.
2 ligand types
3 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 1lvoA
Structures
PDB
Schematic diagram
1lvo
A
1p9u
A
2amp
A
Cluster 1 contains 2 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
MRD × 2
(4r)-2-Methylpentane-2,4-Diol
PDB codes:
1lvo
(A),
1p9u
(A).
2. Ligand:
I12 × 1
N-[(5-Methylisoxazol-3-Yl)carbonyl]-L-Alanyl-L-Valyl- N~1~-((1s)-4-Ethoxy-4-Oxo-1-{[(3s)-2-
Oxopyrrolidin-3- Yl]methyl}but-2-Enyl)-L-Leucinamide
PDB code:
2amp
(A).
Cluster 2 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
DIO × 1
1,4-Diethylene dioxide
PDB code:
1lvo
(A).
Cluster 3 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
DIO × 1
1,4-Diethylene dioxide
PDB code:
1lvo
(A).
Cluster 4 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
DIO × 1
1,4-Diethylene dioxide
PDB code:
1lvo
(A).
Cluster 5 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
1lvo
(A),
1p9u
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
1lvo
(A),
1p9u
(A).