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Ligand clusters for UniProt code P0C6Y5

Ligand clusters for P0C6Y5: Replicase polyprotein 1ab OS=Porcine transmissible gastroenteritis coronavirus (strain Purdue) OX=11151 GN=rep PE=1 SV=1

Top 6 (of 9) ligand clusters
Cluster 1.
2 ligand types
3 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 1lvoA  
JSmol
 

Structures

PDB   Schematic diagram
1lvoA    
1p9uA    
2ampA    

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: MRD × 2
(4r)-2-Methylpentane-2,4-Diol
PDB codes: 1lvo(A), 1p9u(A).


 
2. Ligand: I12 × 1
N-[(5-Methylisoxazol-3-Yl)carbonyl]-L-Alanyl-L-Valyl- N~1~-((1s)-4-Ethoxy-4-Oxo-1-{[(3s)-2-
Oxopyrrolidin-3- Yl]methyl}but-2-Enyl)-L-Leucinamide
PDB code: 2amp(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: DIO × 1
1,4-Diethylene dioxide
PDB code: 1lvo(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: DIO × 1
1,4-Diethylene dioxide
PDB code: 1lvo(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: DIO × 1
1,4-Diethylene dioxide
PDB code: 1lvo(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 1lvo(A), 1p9u(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 1lvo(A), 1p9u(A).

 

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