Ligand clusters for UniProt code P08659

Ligand clusters for P08659: Luciferin 4-monooxygenase OS=Photinus pyralis OX=7054 PE=1 SV=1

		Top 6 (of 38) ligand clusters Cluster 1. 13 ligand types 21 ligands Cluster 2. 3 ligand types 4 ligands Cluster 3. 3 ligand types 3 ligands Cluster 4. 3 ligand types 3 ligands Cluster 5. 2 ligand types 2 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 6q2mA

Structures

PDB		Schematic diagram
6q2mA
4g36A
5kyvA
5kytA
6q2mB
		more ...

Cluster 1 contains 13 ligand types

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Ligand		Description
		1. Ligand: SLU × 7 5'-O-[N-(Dehydroluciferyl)-Sulfamoyl] adenosine PDB codes: 4g36(A), 4g37(A), 5kyt(A), 5kyv(A), 6q2m(A),
		2. Ligand: EDO × 3 1,2-Ethanediol PDB codes: 6q2m(B),
		3. Ligand: 0NJ × 1 2-(2-Fluorophenyl)-6-Methoxy-1,3-Benzothiazole PDB code: 4e5d(A).
		4. Ligand: 5J4 × 1 2-[6-(Cyclobuta-1,3-Dien-1-Ylamino)-1,3-Benzothiazol-2- Yl]-1,3-Thiazol-4-Ol PDB code: 5dwv(A).
		5. Ligand: 7BV × 1 (4s)-2-[6-(Azepan-1-Yl)-1,3-Benzothiazol-2-Yl]-4,5- Dihydro-1,3-Thiazole-4-Carboxylic acid PDB code: 5gz2(A).
		6. Ligand: 7BV-AMP × 1 7BV=(4s)-2-[6-(Azepan-1-Yl)-1,3-Benzothiazol-2-Yl]-4,5- Dihydro-1,3-Thiazole-4-Carboxylic acid, AMP=Adenosine monophosphate. PDB code: 5gyz(A).
		7. Ligand: 7V6 × 1 5-[(3r)-3-(4-Boranylphenyl)-3-Oxidanyl-Propyl]-2- Oxidanyl-Benzoic acid PDB code: 5wys(A).
		8. Ligand: 923 × 1 (5z)-4-Hydroxy-3-[(2r)-2-(2-Hydroxypropan-2-Yl)-2,3- Dihydro-1-Benzofuran-5-Yl]-5-{[(2r)-2-(2- Hydroxypropan-2-Yl)-2,3-Dihydro-1-Benzofuran-5- Yl]methylidene}furan-2(5h)-One PDB code: 3rix(A).
		9. Ligand: DYD × 1 (2s,5s)-Hexane-2,5-Diol PDB code: 6q2m(C).
		10. Ligand: GKH × 1 [(2~{r},3~{s},4~{r},5~{r})-5-(6-Aminopurin-9-Yl)-3,4- Bis(oxidanyl)oxolan-2-Yl]methyl ~{n}-[[2- [(~{E})-2-(6- Oxidanyl-1,3-Benzothiazol-2-Yl)ethenyl]-1,3-Thiazol-4- Yl]carbonyl]sulfamate PDB code: 6hps(A).
		11. Ligand: M24 × 1 5'-O-[(R)-[({3-[5-(2-Fluorophenyl)-1,2,4-Oxadiazol-3- Yl]phenyl}carbonyl)oxy](hydroxy)phosphoryl]adenosine PDB code: 3ies(A).
		12. Ligand: MBR × 1 Tribromomethane PDB code: 1ba3(A).
		13. Ligand: PG4 × 1 Tetraethylene glycol PDB code: 3ier(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 6q2m(C),
		2. Ligand: DYD × 1 (2s,5s)-Hexane-2,5-Diol PDB code: 6q2m(C).
		3. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 5gyz(A).

Cluster 3 contains 3 ligand types

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Ligand		Description
		1. Ligand: DYD × 1 (2s,5s)-Hexane-2,5-Diol PDB code: 6q2m(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 6q2m(C).
		3. Ligand: SO4 × 1 Sulfate ion PDB code: 6q2m(B).

Cluster 4 contains 3 ligand types

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Ligand		Description
		1. Ligand: DYD × 1 (2s,5s)-Hexane-2,5-Diol PDB code: 6q2m(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 6q2m(C).
		3. Ligand: SO4 × 1 Sulfate ion PDB code: 6q2m(C).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 6q2m(A).
		2. Ligand: TLA × 1 L(+)-Tartaric acid PDB code: 5kyv(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: XLX × 1 4,4'-(Ethylenediimino)bis[4-Oxobutyrate] PDB code: 4g37(A).