Ligand clusters for UniProt code P07173

Ligand clusters for P07173: Photosynthetic reaction center cytochrome c subunit from Blastochloris viridis

		Top 6 (of 30) ligand clusters Cluster 1. 2 ligand types 136 ligands Cluster 2. 3 ligand types 12 ligands Cluster 3. 1 ligand type 16 ligands Cluster 4. 2 ligand types 3 ligands Cluster 5. 2 ligand types 4 ligands Cluster 6. 2 ligand types 2 ligands
Representative protein: 3t6eC

Structures

PDB		Schematic diagram
3t6eC
4ac5C
1r2cC
6zi9C
6zi6C
		more ...

Cluster 1 contains 2 ligand types

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Ligand		Description
		1. Ligand: HEC × 104 Heme c PDB codes: 1dxr(C), 1prc(C), 1vrn(C), 2i5n(C), 2jbl(C), 2wjm(C), 2wjn(C), 2x5u(C), 2x5v(C), 3d38(C), 3g7f(C), 3t6e(C), 4cas(A), 5m7j(A), 5m7k(A), 5m7l(A), 5nj4(C), 5o4c(C), 5o64(C), 6zhw(C), 6zi4(C), 6zi5(C), 6zi6(C), 6zi9(C), 6zia(C), 6zid(C),
		2. Ligand: HEM × 32 Protoporphyrin IX containing fe PDB codes: 1r2c(C), 2prc(C), 3prc(C), 4ac5(C), 5prc(C), 6et5(C), 6prc(C), 7prc(C),

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: HTO × 10 Heptane-1,2,3-Triol PDB codes: 5nj4(C), 5o4c(C), 5o64(C), 6zhw(C), 6zi4(C), 6zi5(C), 6zi6(C), 6zi9(C), 6zia(C), 6zid(C).
		2. Ligand: DGA × 1 Diacyl glycerol PDB code: 3t6e(C).
		3. Ligand: UNL × 1 Unknown ligand PDB code: 2i5n(C).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: DGA × 16 Diacyl glycerol PDB codes: 2wjm(C), 3t6e(C), 4cas(A), 5m7j(A), 5m7k(A), 5m7l(A), 5nj4(C), 5o4c(C), 5o64(C), 6zhw(C), 6zi4(C), 6zi5(C), 6zi6(C), 6zi9(C), 6zia(C), 6zid(C).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: LDA × 2 Lauryl dimethylamine-N-Oxide PDB codes: 3t6e(C),
		2. Ligand: SO4 × 1 Sulfate ion PDB code: 3t6e(C).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3t6e(C).
		2. Ligand: HTO × 3 Heptane-1,2,3-Triol PDB codes: 2i5n(C), 3d38(C), 3g7f(C).

Cluster 6 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3t6e(C).
		2. Ligand: HTO × 1 Heptane-1,2,3-Triol PDB code: 3t6e(C).