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Ligand clusters for UniProt code P04004

Ligand clusters for P04004: Vitronectin OS=Homo sapiens OX=9606 GN=VTN PE=1 SV=1

Top 6 (of 7) ligand clusters
Cluster 1.
3 ligand types
4 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6o5eA  
JSmol
 

Structures

PDB   Schematic diagram
6o5eA    
6o5eB    

 

 Cluster 1 contains 3 ligand types

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Ligand Description

_Na
 
1. Metal: _NA × 2
PDB codes: 6o5e(A),


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 6o5e(B).

_Cl
 
3. Metal: _CL × 1
PDB code: 6o5e(B).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 6o5e(A),

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: IMD × 1
Imidazole
PDB code: 6o5e(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: IMD × 1
Imidazole
PDB code: 6o5e(B).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: NO3 × 1
Nitrate ion
PDB code: 6o5e(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: NO3 × 1
Nitrate ion
PDB code: 6o5e(B).

 

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