Ligand clusters for UniProt code P01909

Ligand clusters for P01909: HLA class II histocompatibility antigen, DQ alpha 1 chain OS=Homo sapiens GN=HLA-DQA1 PE=1 SV=1

		5 ligand clusters Cluster 1. 2 ligand types 9 ligands Cluster 2. 1 ligand type 5 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand
Representative protein: 5ksaA

Structures

PDB		Schematic diagram
5ksaA
4gg6A
6mffA
4ozhA
4oziA
		more ...

Cluster 1 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 6 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 4gg6(A), 4ozf(A), 4ozh(A), 4ozi(A), 5ksa(A), 6mff(A).
		2. Ligand: NAG-NAG × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 4ozg(A), 5ksb(A), 6u3m(C).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: NAG × 5 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 4gg6(A), 4ozf(A), 4ozh(A), 5ksb(A), 6mff(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 6u3m(C).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 1s9v(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 6u3m(C).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 1s9v(A).