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Ligand clusters for UniProt code P00763

Ligand clusters for P00763: Anionic trypsin-2 OS=Rattus norvegicus OX=10116 GN=Prss2 PE=1 SV=2

Top 6 (of 14) ligand clusters
Cluster 1.
7 ligand types
28 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
1 ligand type
7 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
2 ligand types
35 ligands
Representative protein: 1amhA  
JSmol
 

Structures

PDB   Schematic diagram
1amhA    
3fp7E    
2trmA    
3fp6E    
1anbA    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: BEN × 11
Benzamidine
PDB codes: 1anb(A), 1anc(A), 1and(A), 1ane(A), 1bra(A), 1dpo(A), 1j14(A), 1j15(A), 1j16(A), 1trm(A), 2trm(A).


 
2. Ligand: EDO × 7
1,2-Ethanediol
PDB codes: 3fp6(E), 3fp7(E), 3fp8(E),


 
3. Ligand: SO4 × 5
Sulfate ion
PDB codes: 1j14(A), 1j15(A), 1j16(A), 1j17(T), 1ql9(A).


 
4. Ligand: ZEN × 2
[4-(6-Chloro-Naphthalene-2-Sulfonyl)-Piperazin-1-Yl]- (3,4,5,6-Tetrahydro-2h-[1,4']Bipyridinyl-4-
Yl)- Methanone
PDB codes: 1j17(T), 1ql9(A).

_Cu
 
5. Metal: _CU × 1
PDB code: 1slv(B).

_Ni
 
6. Metal: _NI × 1
PDB code: 1slw(B).

_Zn
 
7. Metal: _ZN × 1
PDB code: 1slx(B).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: PG4 × 3
Tetraethylene glycol
PDB codes: 3fp6(E), 3fp7(E), 3fp8(E).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: BEN × 7
Benzamidine
PDB codes: 1anb(A), 1anc(A), 1dpo(A), 1j15(A), 1j16(A),

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 1dpo(A), 1j16(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3fp6(E).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: BEN × 2
Benzamidine
PDB codes: 1dpo(A), 1j16(A).

 

 Cluster 6 contains 2 ligand types

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Ligand Description

_Ca
 
1. Metal: _CA × 31
PDB codes: 1amh(A), 1anb(A), 1anc(A), 1bra(A), 1co7(E), 1dpo(A), 1ezs(C), 1ezu(C), 1f5r(A), 1f7z(A), 1fy8(E), 1j14(A), 1j15(A), 1j16(A), 1j17(T), 1ql9(A), 1slu(B), 1slv(B), 1slw(B), 1slx(B), 1trm(A), 1ykt(A), 1ylc(A), 1yld(A), 2trm(A), 3fp6(E), 3fp7(E), 3fp8(E), 3tgi(E), 3tgj(E), 3tgk(E).


 
2. Ligand: ACT × 4
Acetate ion
PDB codes: 1slu(B), 1slv(B), 1slw(B), 1slx(B).

 

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