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Ligand clusters for UniProt code P00763
Ligand clusters for P00763: Anionic trypsin-2 OS=Rattus norvegicus OX=10116 GN=Prss2 PE=1 SV=2
Top 6 (of 14) ligand clusters
Cluster 1.
7 ligand types
28 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
1 ligand type
7 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
2 ligand types
35 ligands
Representative protein: 1amhA
Structures
PDB
Schematic diagram
1amh
A
3fp7
E
2trm
A
3fp6
E
1anb
A
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Cluster 1 contains 7 ligand types
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Ligand
Description
1. Ligand:
BEN × 11
Benzamidine
PDB codes:
1anb
(A),
1anc
(A),
1and
(A),
1ane
(A),
1bra
(A),
1dpo
(A),
1j14
(A),
1j15
(A),
1j16
(A),
1trm
(A),
2trm
(A).
2. Ligand:
EDO × 7
1,2-Ethanediol
PDB codes:
3fp6
(E),
3fp7
(E),
3fp8
(E),
3. Ligand:
SO4 × 5
Sulfate ion
PDB codes:
1j14
(A),
1j15
(A),
1j16
(A),
1j17
(T),
1ql9
(A).
4. Ligand:
ZEN × 2
[4-(6-Chloro-Naphthalene-2-Sulfonyl)-Piperazin-1-Yl]- (3,4,5,6-Tetrahydro-2h-[1,4']Bipyridinyl-4-
Yl)- Methanone
PDB codes:
1j17
(T),
1ql9
(A).
_Cu
5. Metal:
_CU × 1
PDB code:
1slv
(B).
_Ni
6. Metal:
_NI × 1
PDB code:
1slw
(B).
_Zn
7. Metal:
_ZN × 1
PDB code:
1slx
(B).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
PG4 × 3
Tetraethylene glycol
PDB codes:
3fp6
(E),
3fp7
(E),
3fp8
(E).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
BEN × 7
Benzamidine
PDB codes:
1anb
(A),
1anc
(A),
1dpo
(A),
1j15
(A),
1j16
(A),
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
1dpo
(A),
1j16
(A).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3fp6
(E).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
BEN × 2
Benzamidine
PDB codes:
1dpo
(A),
1j16
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
_Ca
1. Metal:
_CA × 31
PDB codes:
1amh
(A),
1anb
(A),
1anc
(A),
1bra
(A),
1co7
(E),
1dpo
(A),
1ezs
(C),
1ezu
(C),
1f5r
(A),
1f7z
(A),
1fy8
(E),
1j14
(A),
1j15
(A),
1j16
(A),
1j17
(T),
1ql9
(A),
1slu
(B),
1slv
(B),
1slw
(B),
1slx
(B),
1trm
(A),
1ykt
(A),
1ylc
(A),
1yld
(A),
2trm
(A),
3fp6
(E),
3fp7
(E),
3fp8
(E),
3tgi
(E),
3tgj
(E),
3tgk
(E).
2. Ligand:
ACT × 4
Acetate ion
PDB codes:
1slu
(B),
1slv
(B),
1slw
(B),
1slx
(B).