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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P00424
Ligand clusters for P00424: Cytochrome c oxidase subunit 5A, mitochondrial from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
3 ligand clusters
Cluster 1.
5 ligand types
7 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
3 ligands
Representative protein: 6hu9e
Structures
PDB
Schematic diagram
6hu9
e
6ymx
e
6ymy
e
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
PCF × 1
colfosceril palmitate
1,2-Diacyl-Sn-Glycero-3-Phoshocholine
PDB code:
6hu9
(e).
2. Ligand:
CN3 × 2
(2r,5s,11r,14r)-5,8,11-Trihydroxy-2-(Nonanoyloxy)-5,11- Dioxido-16-Oxo-14-[(Propanoyloxy)methyl]-
4,6,10,12,15- Pentaoxa-5,11-Diphosphanonadec-1-Yl undecanoate
PDB codes:
6ymx
(e),
6ymy
(e).
3. Ligand:
PTY × 2
Phosphatidylethanolamine
PDB codes:
6ymx
(e),
6ymy
(e).
4. Ligand:
CDL × 1
Cardiolipin
PDB code:
6hu9
(e).
5. Ligand:
PEF × 1
Di-Palmitoyl-3-Sn-Phosphatidylethanolamine
PDB code:
6hu9
(e).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEF × 1
Di-Palmitoyl-3-Sn-Phosphatidylethanolamine
PDB code:
6hu9
(e).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
PCF × 3
colfosceril palmitate
1,2-Diacyl-Sn-Glycero-3-Phoshocholine
PDB codes:
6hu9
(e),
6ymx
(e),
6ymy
(e).