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Ligand clusters for UniProt code P00128

Ligand clusters for P00128: Cytochrome b-c1 complex subunit 7, mitochondrial from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

2 ligand clusters
Cluster 1.
7 ligand types
17 ligands
Cluster 2.
1 ligand type
3 ligands
Representative protein: 3cx5G  
JSmol
 

Structures

PDB   Schematic diagram
3cx5G    
6giqG    
6hu9G    
1kb9G    
1p84G    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: PCF × 2
colfosceril palmitate
1,2-Diacyl-Sn-Glycero-3-Phoshocholine
PDB codes: 6hu9(G), 6t0b(G).


 
2. Ligand: PEF × 1
Di-Palmitoyl-3-Sn-Phosphatidylethanolamine
PDB code: 1kb9(G).


 
3. Ligand: 3PE × 1
1,2-Diacyl-Sn-Glycero-3-Phosphoethanolamine
PDB code: 1p84(G).


 
4. Ligand: CDL × 8
Cardiolipin
PDB codes: 1kb9(G), 1p84(G), 6hu9(G), 6t0b(G), 6t15(G),


 
5. Ligand: 8PE × 3
(2r)-3-{[(S)-(2-Aminoethoxy)(hydroxy)phosphoryl]oxy}-2- (Tetradecanoyloxy)propyl octadecanoate
PDB codes: 3cx5(G), 3cxh(G), 6giq(G).


 
6. Ligand: CN3 × 1
(2r,5s,11r,14r)-5,8,11-Trihydroxy-2-(Nonanoyloxy)-5,11- Dioxido-16-Oxo-14-[(Propanoyloxy)methyl]-
4,6,10,12,15- Pentaoxa-5,11-Diphosphanonadec-1-Yl undecanoate
PDB code: 3cx5(G).


 
7. Ligand: CN6 × 1
(2r,5r,11s,14r)-2-(Butanoyloxy)-5,8,11-Trihydroxy-5,11- Dioxido-16-Oxo-14-[(Propanoyloxy)methyl]-
4,6,10,12,15- Pentaoxa-5,11-Diphosphanonadec-1-Yl undecanoate
PDB code: 3cxh(G).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: PEF × 3
Di-Palmitoyl-3-Sn-Phosphatidylethanolamine
PDB codes: 6hu9(G), 6t0b(G), 6t15(G).

 

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