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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code O75367
Ligand clusters for O75367: Core histone macro-H2A.1 OS=Homo sapiens OX=9606 GN=MACROH2A1 PE=1 SV=4
5 ligand clusters
Cluster 1.
3 ligand types
5 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 5iitA
Structures
PDB
Schematic diagram
5iit
A
3iid
A
3iif
A
1zr3
A
3ivb
M
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
APR × 2
Adenosine-5-Diphosphoribose
PDB codes:
3iid
(A),
3iif
(A).
2. Ligand:
MES × 2
2-(N-Morpholino)-Ethanesulfonic acid
PDB codes:
1zr3
(A),
5iit
(A).
3. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5iit
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
5iit
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
NO3 × 1
Nitrate ion
PDB code:
3iid
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5iit
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Cl
1. Metal:
_CL × 1
PDB code:
3ivb
(M).