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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code H0W0T5
Ligand clusters for H0W0T5: Uncharacterized protein OS=Cavia porcellus GN=ASPG PE=1 SV=1
Top 6 (of 9) ligand clusters
Cluster 1.
3 ligand types
5 ligands
Cluster 2.
3 ligand types
5 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4r8kA
Structures
PDB
Schematic diagram
4r8k
A
4r8l
A
5dne
A
5dnd
A
5dnc
A
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
ASN × 3
PDB codes:
5dnc
(A),
5dnd
(A),
5dne
(A).
2. Ligand:
ASP × 1
PDB code:
4r8l
(A).
3. Ligand:
EPE × 1
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB code:
4r8k
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
ASN × 3
PDB codes:
5dnc
(A),
5dnd
(A),
5dne
(A).
2. Ligand:
ASP × 1
PDB code:
4r8l
(A).
3. Ligand:
EPE × 1
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB code:
4r8k
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5dnc
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5dnc
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5dnc
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5dnc
(A).