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Ligand clusters for UniProt code D9PYF9

Ligand clusters for D9PYF9: F420-reducing hydrogenase, subunit alpha OS=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) GN=frhA PE=1 SV=1

5 ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 4ci0A  
JSmol
 

Structures

PDB   Schematic diagram
4ci0A    
4omfA    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: NFU × 1
Formyl[bis(hydrocyanato-1kappac)]ironnickel(fe-Ni)
PDB code: 4omf(A).

_Fe
 
2. Metal: _FE × 1
PDB code: 4ci0(A).

_Ni
 
3. Metal: _NI × 1
PDB code: 4ci0(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: SF4 × 2
Iron/sulfur cluster
PDB codes: 4ci0(A), 4omf(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description

Fe2
 
1. Metal: FE2 × 1
PDB code: 4ci0(A).

_Mg
 
2. Metal: _MG × 1
PDB code: 4omf(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Cl
 
1. Metal: _CL × 1
PDB code: 4omf(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 4omf(A).

 

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