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Ligand clusters for UniProt code D5DC07

Ligand clusters for D5DC07: Levansucrase OS=Bacillus megaterium (strain DSM 319) GN=sacB PE=1 SV=1

Top 6 (of 8) ligand clusters
Cluster 1.
3 ligand types
4 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3om2A  
JSmol
 

Structures

PDB   Schematic diagram
3om2A    
3om7C    
3om6A    
3om4A    
3om5A    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: PGE × 2
Triethylene glycol
PDB codes: 3om4(A), 3om7(C).


 
2. Ligand: P6G × 1
Hexaethylene glycol
PDB code: 3om5(A).


 
3. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 3om4(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: CIT × 1
Citric acid
PDB code: 3om2(A).

_Mg
 
2. Metal: _MG × 1
PDB code: 3om2(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: CIT × 1
Citric acid
PDB code: 3om2(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 3om4(A), 3om6(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3om4(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3om7(C).

 

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