Ligand clusters for UniProt code C4B644

Ligand clusters for C4B644: Vitamin D(3) 25-hydroxylase OS=Pseudonocardia autotrophica OX=2074 GN=vdh PE=1 SV=1

		Top 6 (of 7) ligand clusters Cluster 1. 4 ligand types 12 ligands Cluster 2. 2 ligand types 6 ligands Cluster 3. 1 ligand type 3 ligands Cluster 4. 1 ligand type 3 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 3 ligands
Representative protein: 3a4zA

Structures

PDB		Schematic diagram
3a4zA
3a50A
3a51A
3vrmA
5gnlA
		more ...

Cluster 1 contains 4 ligand types

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Ligand		Description
		1. Ligand: VD3 × 2 cholecalciferol (1s,3z)-3-[(2e)-2-[(1r,3ar,7as)-7a-Methyl-1-[(2r)-6- Methylheptan-2-Yl]-2,3,3a,5,6,7-Hexahydro-1h- Inden-4- Ylidene]ethylidene]-4-Methylidene-Cyclohexan-1-Ol PDB codes: 3a50(A), 3vrm(A).
		2. Ligand: HEM × 7 Protoporphyrin IX containing fe PDB codes: 3a4g(A), 3a4h(A), 3a4z(A), 3a50(A), 3vrm(A), 5gnl(A), 5gnm(A).
		3. Ligand: PG0 × 2 2-(2-Methoxyethoxy)ethanol PDB codes: 3a4g(A), 5gnl(A).
		4. Ligand: HEM-VDY × 1 HEM=Protoporphyrin IX containing fe, VDY=3-{2-[1-(5-Hydroxy-1,5-Dimethyl-Hexyl)-7a-Methyl- Octahydro-Inden-4-Ylidene]-Ethylidene}-4- Methylene- Cyclohexanol. PDB code: 3a51(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 3a4z(A), 3a50(A), 3a51(A).
_Ca		2. Metal: _CA × 3 PDB codes: 3a4z(A), 3a50(A), 3a51(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 3a4z(A), 3a50(A), 3a51(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: ACT × 3 Acetate ion PDB codes: 3a4z(A), 3a50(A), 3a51(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
_Ca		1. Metal: _CA × 1 PDB code: 3a4h(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
_Ca		1. Metal: _CA × 3 PDB codes: 3a4z(A), 3a50(A), 3a51(A).