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Ligand clusters for UniProt code B7NY59

Ligand clusters for B7NY59: Hemagglutinin (Fragment) OS=Influenza A virus (A/chicken/New Jersey/Sg-00421/2004(H7N2)) GN=HA PE=1 SV=1

5 ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
4 ligands
Cluster 5.
1 ligand type
1 ligand
Representative protein: 3m5gA  
JSmol
 

Structures

PDB   Schematic diagram
3m5gA    
3m5jA    
3m5hA    
3m5iA    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: SIA-GAL × 1
SIA=O-Sialic acid, GAL=Beta-D-Galactose.
PDB code: 3m5i(A).


 
2. Ligand: SIA-NAG-GAL × 1
SIA=O-Sialic acid, NAG=N-Acetyl-D-Glucosamine, GAL=Beta-D-Galactose.
PDB code: 3m5h(A).


 
3. Ligand: SIA-NAG-GAL-GAL × 1
NAG=N-Acetyl-D-Glucosamine, SIA=O-Sialic acid, GAL=Beta-D-Galactose.
PDB code: 3m5j(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 1
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB code: 3m5j(A).


 
2. Ligand: NAG-NAG × 3
NAG=N-Acetyl-D-Glucosamine.
PDB codes: 3m5g(A), 3m5h(A), 3m5i(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 1
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB code: 3m5j(A).


 
2. Ligand: NAG-NAG × 1
NAG=N-Acetyl-D-Glucosamine.
PDB code: 3m5i(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 4
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes: 3m5g(A), 3m5h(A), 3m5i(A), 3m5j(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 3m5g(A).

 

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