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EBI
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PDBsum
Ligand clusters for UniProt code B0KAW2
Ligand clusters for B0KAW2: Type IV secretory pathway VirB4 components-like protein (Precursor) OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=Teth39_0060 PE=1 SV=1
Top 6 (of 7) ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4ag5A
Structures
PDB
Schematic diagram
4ag5
A
4ag6
A
4ag5
D
4ag5
C
4ag6
C
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
ADP × 1
Adenosine-5'-Diphosphate
PDB code:
4ag5
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
4ag6
(A).
_Mg
3. Metal:
_MG × 1
PDB code:
4ag5
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
ADP × 1
Adenosine-5'-Diphosphate
PDB code:
4ag5
(D).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
Glycerol
PDB code:
4ag5
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
Glycerol
PDB code:
4ag5
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
4ag5
(A),
4ag6
(A),
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
4ag6
(A).