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EBI
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PDBsum
Ligand clusters for UniProt code A0A146CJG7
Ligand clusters for A0A146CJG7: Genome polyprotein from Zika virus
5 ligand clusters
Cluster 1.
5 ligand types
7 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
1 ligand type
4 ligands
Representative protein: 5k8lA
Structures
PDB
Schematic diagram
5k8l
A
5k8t
A
5k8u
A
5k8i
A
Cluster 1 contains 5 ligand types
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Ligand
Description
_Mn
1. Metal:
_MN × 2
PDB codes:
5k8i
(A),
5k8u
(A).
_Mg
2. Metal:
_MG × 1
PDB code:
5k8t
(A).
3. Ligand:
GSP × 2
5'-Guanosine-Diphosphate-Monothiophosphate
PDB codes:
5k8l
(A),
5k8t
(A).
4. Ligand:
ADP × 1
Adenosine-5'-Diphosphate
PDB code:
5k8u
(A).
5. Ligand:
ATP × 1
Adenosine-5'-Triphosphate
PDB code:
5k8i
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
5k8l
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
5k8l
(A),
5k8u
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
_Mn
1. Metal:
_MN × 2
PDB codes:
5k8i
(A),
5k8u
(A).
_Mg
2. Metal:
_MG × 1
PDB code:
5k8t
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Cl
1. Metal:
_CL × 4
PDB codes:
5k8i
(A),
5k8l
(A),
5k8t
(A),
5k8u
(A).